Automatic detection and quantification of tree-in-bud (TIB) opacities from CT scans
IEEE Transactions on Biomedical Engineering, 59(6), 1620–1632
Abstract
This study presents a novel computer-assisted detection (CAD) system for automatically detecting and precisely quantifying abnormal nodular branching opacities in chest computed tomography (CT), termed tree-in-bud (TIB) opacities by radiology literature. The developed CAD system in this study is based on 1) fast localization of candidate imaging patterns using local scale information of the images, and 2) Möbius invariant feature extraction method based on learned local shape and texture properties of TIB patterns. For fast localization of candidate imaging patterns, we use ball-scale filtering and, based on the observation of the pattern of interest, a suitable scale selection is used to retain only small size patterns. Once candidate abnormality patterns are identified, we extract proposed shape features from regions where at least one candidate pattern occupies. The comparative evaluation of the proposed method with commonly used CAD methods is presented with a dataset of 60 chest CTs (laboratory confirmed 39 viral bronchiolitis human parainfluenza CTs and 21 normal chest CTs). The quantitative results are presented as the area under the receiver operator characteristics curves and a computer score (volume affected by TIB) provided as an output of the CAD system. In addition, a visual grading scheme is applied to the patient data by three well-trained radiologists. Interobserver and observer-computer agreements are obtained by the relevant statistical methods over different lung zones. Experimental results demonstrate that the proposed CAD system can achieve high detection rates with an overall accuracy of 90.96%. Moreover, correlations of observer-observer (R(2)=0.8848, and observer-CAD agreements (R(2)=0.824, validate the feasibility of the use of the proposed CAD system in detecting and quantifying TIB patterns.
Abstract sourceThis 2012 study presents a computer-assisted method for detecting and quantifying tree-in-bud opacities in chest CT scans. The authors evaluated the method on 60 scans and compared its outputs with radiologist assessments.
Summary
The paper describes a computer-assisted detection (CAD) system for identifying tree-in-bud (TIB) opacities—abnormal nodular branching patterns—in chest computed tomography (CT). The method uses ball-scale filtering to locate candidate patterns, followed by shape and texture features to characterize them. The study evaluated the approach on 60 chest CT scans: 39 from laboratory-confirmed human parainfluenza cases and 21 normal scans.
The authors report an overall accuracy of 90.96% and assess agreement between computer scores and radiologists’ visual grading. These findings are from the study’s evaluation dataset; they do not establish performance in other populations or settings, or clinical readiness. Read the full article in PubMed Central.
Cite this work
Ulas Bagci, Jianhua Yao, Albert Wu, Jesus Caban, Tara N Palmore, Anthony F Suffredini, Omer Aras, Daniel J Mollura (2012). Automatic detection and quantification of tree-in-bud (TIB) opacities from CT scans. IEEE Transactions on Biomedical Engineering, 59(6), 1620–1632 https://doi.org/10.1109/TBME.2012.2190984
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