Publications

Pediatric pancreas segmentation from MRI scans with deep learning

Elif Keles, Merve Yazol, Gorkem Durak, Ziliang Hong, Halil Ertugrul Aktas, Zheyuan Zhang, Linkai Peng, Onkar Susladkar, Necati Guzelyel, Oznur Leman Boyunaga, Cemal Yazici, Mark Lowe, Aliye Uc, Ulas Bagci

Physics-informed autoencoder for prostate tissue microstructure profiling with hybrid multidimensional MRI

Batuhan Gundogdu, Aritrick Chatterjee, Milica Medved, Ulas Bagci, Gregory S Karczmar, Aytekin Oto

Position of artificial intelligence in healthcare and future perspective

Vedat Cicek and Ulas Bagci

Predicting risk of pulmonary fibrosis formation in PASC patients

Wanying Dou, Gorkem Durak, Koushik Biswas, Ziliang Hong, Andrea Mia Bejar, Elif Keles, Kaan Akin, Sukru Mehmet Erturk, Alpay Medetalibeyoglu, Marc Sala, Alexander Misharin, Hatice Savas, Mary Salvatore, Sachin Jambawalikar, Drew Torigian, Jayaram K. Udupa, Ulas Bagci

Predictive strength of inflammatory scores for in-hospital mortality in infective endocarditis

Vedat Cicek, Almina Erdem, Sahhan Kilic, Burak Tay, Mustafa Kamil Yemis, Solen Taslicukur, Mustafa Oguz, Ahmet Oz, Murat Selcuk, Tufan Cinar, Ulas Bagci

Radiologic and clinical correlates of long-term post-COVID-19 pulmonary sequelae

Gorkem Durak, Kaan Akin, Okan Cetin, Emre Uysal, Halil Ertugrul Aktas, Ulku Durak, Ahmet Yasin Karkas, Naci Senkal, Hatice Savas, Atadan Tunaci, Alpay Medetalibeyoglu, Ulas Bagci and Sukru Mehmet Erturk

Alec Peltekian et al

Radiomics for detecting metaplastic histology in triple-negative breast cancer: a step towards personalized therapy

Rana Gunoz Comert, Gorkem Durak, Ravza Yilmaz, Halil Ertugrul Aktas, Zeynep Tuz, Hongyi Pan, Jun Zeng, Aysel Bayram, Baran Mollavelioglu, Sukru Mehmet Erturk, Ulas Bagci

Radiomics-based machine learning models improve acute pancreatitis severity prediction

Ahmet Yasin Karkas et al.

Andrea Mia Bejar et al

Role of imaging in pancreatic cancer screening for high-risk population with genetic and hereditary causes linked to specific genetic syndromes or mutations

Pardeep K. Mittal, MD, Srinivasa R. Prasad, MD, Anil K. Dasyam, MD, Venkata S. Katabathina, MD, Courtney C. Moreno, MD, Camila Lopes Vendrami, MD, Ulas Bagci, MSc, PhD, Frank H. Miller

Rosette trajectory MRI reconstruction with vision transformers

M. Fikret Yalcinbas, Cengizhan Ozturk, Onur Ozyurt, Uzay E. Emir and Ulas Bagci

SAM-guided prompt learning for multiple sclerosis lesion segmentation

Federica Proietto Salanitri, Giovanni Bellitto, Salvatore Calcagno, Ulas Bagci, Concetto Spampinato, Manuela Pennisi

David Wong, Bin Wang, et al.

TAGS: 3D tumor-adaptive guidance for SAM

Sirui Li, Linkai Peng, Zheyuan Zhang, Gorkem Durak, Ulas Bagci

Vandan Gorade, Onkar Susladkar, Gorkem Durak, Elif Keles, Ertugrul Aktas, Timurhan Cebeci, Alpay Medetalibeyoglu, Daniela P. Ladner, Debesh Jha, and Ulas Bagci

Transformer-enhanced iterative feedback mechanism for polyp segmentation

Nikhil Tomar, Debesh Jha, Koushik Biswas, Ulas Bagci

Uncertainty-guided coarse-to-fine tumor segmentation with anatomy-aware post-processing

Ilkin Sevgi Isler, David Mohaisen, Curtis Lisle, Damla Turgut, Ulas Bagci

Uncertainty-guided cross attention ensemble mean teacher for semi-supervised medical image segmentation

Meghana Karri, Amit Soni Arya, Koushik Biswas, Nicolo Gennaro, Vedat Cicek, Gorkem Durak, Yury Velichko, Ulas Bagci

Unsupervised clustering successfully predicts prognosis in NSCLC brain metastasis cohorts

Emre Uysal, Gorkem Durak, Ayse Kotek Sedef, Ulas Bagci, Tanju Berber, Necla Gurdal, Berna Akkus Yildirim